CheneBelgiqueV2, Main, Exploration, bibRecord, 000D21

AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations

Identifieur interne : 000D21 ( Main/Exploration ); précédent : 000D20; suivant : 000D22

AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations

Auteurs : E. Coart [Belgique] ; V. Lamote [Belgique] ; M. De Loose [Belgique] ; E. Van Bockstaele [Belgique] ; P. Lootens [Belgique] ; I. Roldan-Ruiz [Belgique]

Source :

Theoretical and Applied Genetics [ 0040-5752 ] ; 2002.

RBID : Pascal:02-0510972

Descripteurs français

Pascal (Inist)
- Marqueur moléculaire, Biologie moléculaire, Variabilité génétique, Marqueur AFLP, Marqueur génétique, Différenciation, Quercus petraea, Quercus robur, Arbre forestier feuillu.

English descriptors

KwdEn :
- Amplified fragment length polymorphism marker, Differentiation, Genetic marker, Genetic variability, Hardwood forest tree, Molecular biology, Molecular marker, Quercus petraea, Quercus robur.

Abstract

The nuclear genetic variation within and between four sessile (Q. petraea) and six pedunculate (Q. robur) autochthonous Flemish oak populations was investigated with AFLP markers. One sessile and one pedunculate oak population were additionally screened for detailed leaf characteristics using an image analysis system. Principal coordinate analysis on the AFLP data classified the oaks in two main groups, according to their taxonomic status. No species-specific AFLP markers were found using four primer combinations, but marker frequency differences up to 71% were recorded between both species. Analysis of the genetic structure showed that the divergence between species, as observed by ordination, was significant. Both species revealed similar diversity levels. A smaller though significant differentiation was also revealed for both species among populations within species. Molecular and morphology based approaches showed a high degree of consistency. Screening of 60 AFLP primer combinations using a bulking strategy did not allow identifying species-specific markers, which supports the conclusions reached in previous studies. The distribution of genetic variability at the species and at the population level is discussed.

Affiliations:

Links toward previous steps (curation, corpus...)

to stream PascalFrancis, to step Corpus: 000111
to stream PascalFrancis, to step Curation: 000024
to stream PascalFrancis, to step Checkpoint: 000127
to stream Main, to step Merge: 000D39
to stream Main, to step Curation: 000D21

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en" level="a">AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations</title>
<author><name sortKey="Coart, E" sort="Coart, E" uniqKey="Coart E" first="E." last="Coart">E. Coart</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Lamote, V" sort="Lamote, V" uniqKey="Lamote V" first="V." last="Lamote">V. Lamote</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
<affiliation wicri:level="3"><inist:fA14 i1="02"><s1>University of Ghent, Faculty of Agricultural and Applied Biological sciences, Coupure Links 653</s1>
<s2>9000 Gent</s2>
<s3>BEL</s3>
<sZ>2 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<placeName><region type="province" nuts="2">Province de Flandre-Orientale</region>
<settlement type="city">Gand</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="De Loose, M" sort="De Loose, M" uniqKey="De Loose M" first="M." last="De Loose">M. De Loose</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Van Bockstaele, E" sort="Van Bockstaele, E" uniqKey="Van Bockstaele E" first="E." last="Van Bockstaele">E. Van Bockstaele</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
<affiliation wicri:level="3"><inist:fA14 i1="02"><s1>University of Ghent, Faculty of Agricultural and Applied Biological sciences, Coupure Links 653</s1>
<s2>9000 Gent</s2>
<s3>BEL</s3>
<sZ>2 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<placeName><region type="province" nuts="2">Province de Flandre-Orientale</region>
<settlement type="city">Gand</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lootens, P" sort="Lootens, P" uniqKey="Lootens P" first="P." last="Lootens">P. Lootens</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Department of Crop Husbandry and Ecophysiology, Agricultural Research Centre, Burg, Van Gansberghelaan 109</s1>
<s2>9820 Merelbeke</s2>
<s3>BEL</s3>
<sZ>5 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9820 Merelbeke</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Roldan Ruiz, I" sort="Roldan Ruiz, I" uniqKey="Roldan Ruiz I" first="I." last="Roldan-Ruiz">I. Roldan-Ruiz</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">INIST</idno>
<idno type="inist">02-0510972</idno>
<date when="2002">2002</date>
<idno type="stanalyst">PASCAL 02-0510972 INIST</idno>
<idno type="RBID">Pascal:02-0510972</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">000111</idno>
<idno type="wicri:Area/PascalFrancis/Curation">000024</idno>
<idno type="wicri:Area/PascalFrancis/Checkpoint">000127</idno>
<idno type="wicri:explorRef" wicri:stream="PascalFrancis" wicri:step="Checkpoint">000127</idno>
<idno type="wicri:doubleKey">0040-5752:2002:Coart E:aflp:markers:demonstrate</idno>
<idno type="wicri:Area/Main/Merge">000D39</idno>
<idno type="wicri:Area/Main/Curation">000D21</idno>
<idno type="wicri:Area/Main/Exploration">000D21</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations</title>
<author><name sortKey="Coart, E" sort="Coart, E" uniqKey="Coart E" first="E." last="Coart">E. Coart</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Lamote, V" sort="Lamote, V" uniqKey="Lamote V" first="V." last="Lamote">V. Lamote</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
<affiliation wicri:level="3"><inist:fA14 i1="02"><s1>University of Ghent, Faculty of Agricultural and Applied Biological sciences, Coupure Links 653</s1>
<s2>9000 Gent</s2>
<s3>BEL</s3>
<sZ>2 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<placeName><region type="province" nuts="2">Province de Flandre-Orientale</region>
<settlement type="city">Gand</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="De Loose, M" sort="De Loose, M" uniqKey="De Loose M" first="M." last="De Loose">M. De Loose</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Van Bockstaele, E" sort="Van Bockstaele, E" uniqKey="Van Bockstaele E" first="E." last="Van Bockstaele">E. Van Bockstaele</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
<affiliation wicri:level="3"><inist:fA14 i1="02"><s1>University of Ghent, Faculty of Agricultural and Applied Biological sciences, Coupure Links 653</s1>
<s2>9000 Gent</s2>
<s3>BEL</s3>
<sZ>2 aut.</sZ>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<placeName><region type="province" nuts="2">Province de Flandre-Orientale</region>
<settlement type="city">Gand</settlement>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lootens, P" sort="Lootens, P" uniqKey="Lootens P" first="P." last="Lootens">P. Lootens</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Department of Crop Husbandry and Ecophysiology, Agricultural Research Centre, Burg, Van Gansberghelaan 109</s1>
<s2>9820 Merelbeke</s2>
<s3>BEL</s3>
<sZ>5 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9820 Merelbeke</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Roldan Ruiz, I" sort="Roldan Ruiz, I" uniqKey="Roldan Ruiz I" first="I." last="Roldan-Ruiz">I. Roldan-Ruiz</name>
<affiliation wicri:level="1"><inist:fA14 i1="01"><s1>Department for Plant Genetics and Breeding, Agricultural Research Centre, Caritasstraat 21</s1>
<s2>9090 Melle</s2>
<s3>BEL</s3>
<sZ>1 aut.</sZ>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>4 aut.</sZ>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Belgique</country>
<wicri:noRegion>9090 Melle</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j" type="main">Theoretical and Applied Genetics</title>
<title level="j" type="abbreviated">Theor. Appl. Genet.</title>
<idno type="ISSN">0040-5752</idno>
<imprint><date when="2002">2002</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><title level="j" type="main">Theoretical and Applied Genetics</title>
<title level="j" type="abbreviated">Theor. Appl. Genet.</title>
<idno type="ISSN">0040-5752</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Amplified fragment length polymorphism marker</term>
<term>Differentiation</term>
<term>Genetic marker</term>
<term>Genetic variability</term>
<term>Hardwood forest tree</term>
<term>Molecular biology</term>
<term>Molecular marker</term>
<term>Quercus petraea</term>
<term>Quercus robur</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Marqueur moléculaire</term>
<term>Biologie moléculaire</term>
<term>Variabilité génétique</term>
<term>Marqueur AFLP</term>
<term>Marqueur génétique</term>
<term>Différenciation</term>
<term>Quercus petraea</term>
<term>Quercus robur</term>
<term>Arbre forestier feuillu</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The nuclear genetic variation within and between four sessile (Q. petraea) and six pedunculate (Q. robur) autochthonous Flemish oak populations was investigated with AFLP markers. One sessile and one pedunculate oak population were additionally screened for detailed leaf characteristics using an image analysis system. Principal coordinate analysis on the AFLP data classified the oaks in two main groups, according to their taxonomic status. No species-specific AFLP markers were found using four primer combinations, but marker frequency differences up to 71% were recorded between both species. Analysis of the genetic structure showed that the divergence between species, as observed by ordination, was significant. Both species revealed similar diversity levels. A smaller though significant differentiation was also revealed for both species among populations within species. Molecular and morphology based approaches showed a high degree of consistency. Screening of 60 AFLP primer combinations using a bulking strategy did not allow identifying species-specific markers, which supports the conclusions reached in previous studies. The distribution of genetic variability at the species and at the population level is discussed.</div>
</front>
</TEI>
<affiliations><list><country><li>Belgique</li>
</country>
<region><li>Province de Flandre-Orientale</li>
</region>
<settlement><li>Gand</li>
</settlement>
</list>
<tree><country name="Belgique"><noRegion><name sortKey="Coart, E" sort="Coart, E" uniqKey="Coart E" first="E." last="Coart">E. Coart</name>
</noRegion>
<name sortKey="De Loose, M" sort="De Loose, M" uniqKey="De Loose M" first="M." last="De Loose">M. De Loose</name>
<name sortKey="Lamote, V" sort="Lamote, V" uniqKey="Lamote V" first="V." last="Lamote">V. Lamote</name>
<name sortKey="Lamote, V" sort="Lamote, V" uniqKey="Lamote V" first="V." last="Lamote">V. Lamote</name>
<name sortKey="Lootens, P" sort="Lootens, P" uniqKey="Lootens P" first="P." last="Lootens">P. Lootens</name>
<name sortKey="Roldan Ruiz, I" sort="Roldan Ruiz, I" uniqKey="Roldan Ruiz I" first="I." last="Roldan-Ruiz">I. Roldan-Ruiz</name>
<name sortKey="Van Bockstaele, E" sort="Van Bockstaele, E" uniqKey="Van Bockstaele E" first="E." last="Van Bockstaele">E. Van Bockstaele</name>
<name sortKey="Van Bockstaele, E" sort="Van Bockstaele, E" uniqKey="Van Bockstaele E" first="E." last="Van Bockstaele">E. Van Bockstaele</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/CheneBelgiqueV2/Data/Main/Exploration

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000D21 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000D21 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Bois
   |area=    CheneBelgiqueV2
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     Pascal:02-0510972
   |texte=   AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations
}}

This area was generated with Dilib version V0.6.27.
Data generation: Wed Mar 22 20:06:11 2017. Site generation: Wed Mar 6 16:09:04 2024

	Serveur d'exploration sur le chêne en Belgique
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur le chêne en Belgique

AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations

AFLP markers demonstrate local genetic differentiation between two indigenous oak species [Quercus robur L. and Quercus petraea (Matt.) Liebl.] in Flemish populations

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri